Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGPAYNHTMETPASFLLVGIPGLQSSHLWLAISLSAMYITALLGNTLIVTAIWMDSTRHEPMYCFLCVLAAVDIVMASSVVPKMVSIFCSGDSSISFSACFTQMFFVHLATAVETGLLLTMAFDRYVAICKPLHYKRILTPQVMLGMSMAVTIRAVTFMTPLSWMMNHLPFCGSNVVVHSYCKHIALARLACADPVPSSLYSLIGSSLMVGSDVAFIAASYILILRAVFDLSSKTAQLKALSTCGSHVGVMALYYLPGMASIYAAWLGQDIVPLHTQVLLADLYVIIPATLNPIIYGMRTKQLLEGIWSYLMHFLFDHSNLGS------- |
| 4TVS Chain:A ((8-231)) | -VETTAVQEFQNQMNQLKNKYQG-QDEKLWKR-SQTFLEKHLNSSHPRSQPAILLLTAARDAEEALRCLSEQIADAYSSFRSVRAIRIDGTDKATQD-----------SDTVKLEVDQELSNGFKN--------------------GQNAAVVHR-----------FESFP-AGSTLIFYKYCDH-------------------------------------------------ENAAFKDV--------ALVLTVLLEEETLGTSLGLKEVEEKVRDFLKVKFTN----SNTPNSYNHMDPDKLNGLWSRISHLVLPVQPENALKRGICL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226593 for 1793 contacts (-126.4/contact) +
2D Compatibility (PS) -22966 + (NN) -7966 + (LL) 9732
1D Compatibility (HY) 1600 + (ID) 1800
Total energy: -247993.0 ( -138.31 by residue)
QMean score : 0.230
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