Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MGDNITSITEFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLIS-----LDSRLHAPMYFFLSHLAVV--------------DIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFL--------------FSTFAVTECLLLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLV-----LLLPLPFCRPQKIYHFF--------CEILAVLKLACADTHINENMVLAGAISGL--------VGPLSTIVVSYMCILCAILQIQSRE-VQRKAFCTCFSHLCVIGLFYGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL------------------------------------------------------ |
| 4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLV-YCVNYFIARSGDASWLNTDGWRYM--FASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227555 for 2242 contacts (-101.5/contact) +
2D Compatibility (PS) -31015 + (NN) -3901 + (LL) 448
1D Compatibility (HY) -23600 + (ID) 2900
Total energy: -288523.0 ( -128.69 by residue)
QMean score : 0.210
|
|
|