Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQYNHSSLAEFVFLGFASVGYVRGWLFVLLL------------------LAYLFTICGNMLIFSVIRLDAALHTPMYHFVSVLSFLELWYTATTIPKMLSNILSEKKTISFAGCLLQTYFFHSLGASECYLLTAMAYDRYLAIC---RPLHYPIIMTTTLCAKMAAACWTCGFLCPISEVILASQL-PFCAYNEIQHIFCD----FPPLLSLACKDTSANILVDFAINAFIILITFFFIMISYARIIGAVLKIK---TASGRKKAFSTCASHLAVVLIFFGSIIFMYVRLKKSYSLTLDRTLAIVYSVLTPMVNPIIYSLRNKEIIKAIKRTIFQKGDKASLAHL |
| 4QTZ Chain:A ((1-321)) | --------LGNVVCVTGAS-GYIASWLVRLLLHRGYTVKATVRDPNDPKKVDHLVKLDGAKERLQLFKAN---LLEEGAFDSVVQGCHGVFH--TASPFYHDVKDPQAELIDPALKGTLNVLNSCAKSP-SLKRVVLTSSIAAVAYNGKPRTPDVVVDETWFTD-ADFCAKSNLWYVVSKTLAEEAAWKFVKENNIDMVTINPAMVIGPLLQPVLNTSAAAIL--NLINGAQTFPNASFGWVNVKDVANAHILAYENASASGRHCLVERVAHYSEVVRILREL----YPSLQLPEKCADDKPYVPIYQVSKEKAKSL--GLEYTPLEVSIKETVESLKEK-KFANL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -320657 for 2334 contacts (-137.4/contact) +
2D Compatibility (PS) -29595 + (NN) 7287 + (LL) 2672
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -355643.0 ( -152.37 by residue)
QMean score : 0.198
|
|
|