Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MEPGNDTQISEFLLLGFSQEPGLQPFLFGLFLSMYLVTVLGNLLIILATISDSHLHTPMYFFLSNLSFADICVTSTTIPKMLMNIQT----QNKVITYIACLMQMYFFILFAGFENFLLSVMAYDRFVAICHPLHYMVIMNPHLCGLLVLASWTMSALYSLLQILMVVRLSFCTALEIPHFFCELNQVIQLACSDSFLNHMVIYFTVA--LLGGGPLTGILYSYSKIISSIHAISSAQ-GKYKAFSTCASHLSVVSLFYGAILG-VYLSSAATRNSHSS------------ATASVMYTVVTPMLNPFIYSLR----NKDIKRALGIHLLW--------GTMKGQFFKKCP-------------------------- |
| 4RDQ Chain:A ((1-366)) | TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFL-IFISLYFAISLVYRLILSESQRLMFEKLALYCNSYAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNV--------------DGEDEYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFPSMEHVVRAGLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPPYTAATAEYKRPSFLGSTFDIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259750 for 2000 contacts (-129.9/contact) +
2D Compatibility (PS) -30183 + (NN) -3501 + (LL) 1324
1D Compatibility (HY) -16400 + (ID) 2550
Total energy: -311060.0 ( -155.53 by residue)
QMean score : 0.208
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