Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MLGNYSSATEFFLLGFPG----SQEVCRILFATFFLLYA-------VTVMGNV--------------VIIITVC-------VDKCLQSPIYFFLGHLCVLEILITSTAVPFMLWGLLLPSTQIMSLTACAAQLYLYLSLGTLELALMGVMAVDRYVAVCNPLR-----------YNIIMNSSTFIWVIIVSWVLGFL----------SEIWPVYATFQLTFC-KSSVLD-HFYCDRGQLLKVSCEDTLFREFILFLMAVFIIIGSLIPTIVSYTYIISTNLKIPSASGWR------KSFSTCASHFTYV----------VIGYGSCLFLYVKPK---- |
| 4UZ1 Chain:A ((9-375)) | NEDLRLHLLLNTSVTCNDGSPAGYYLKESRGSRRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSGASSKSEKNEYAFMGALIIQEVVRELLGRGLSGAKVLL----LAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLDNKQYRHTDCVDTITCAPTEAIRRGIRYWNGVVPERCRRQFQEGEEWNCFFGYKVYPTLRSPVFVVQWLFDEAQLTVDNVHLPVQEGLRLYIQNLGRELRHTLKDVPASFAPACLSHEIIIRSHWTDVQVKGTSLPRALHCWDRSLHKTPLKGCPVHLVDSCPWPHCNPSCPTG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325440 for 1987 contacts (-163.8/contact) +
2D Compatibility (PS) -26653 + (NN) -2206 + (LL) 4
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -361195.0 ( -181.78 by residue)
QMean score : 0.271
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