Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHFTKNSQVLDVAGGTGDIAIRIVRREPSVQVTVCDINQNMLSRGRNKAINSNQLNFNWVCANAESLPFEDSEFDCCTIAFGIRNVS--DRKKALSEIHRVLKPNGQFICLEFAPMHYKNEIFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK
3UJC Chain:A ((47-205))
------------------------------------ILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC--ATEKENWDDEFKE----Y---VK--------------QRKYTLITVEEYADILTACNFKNVVSKDLSDYWNQLLEVEH
General information:
TITO was launched using:
RESULT:
Template:
3UJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100697 for 1165 contacts (-86.4/contact) +
2D Compatibility (PS) -17034 + (NN) -3391 + (LL) 4280
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -125292.0 ( -107.55 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_3UJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UJC-query.scw
PDB file :
Tito_Scwrl_3UJC.pdb
: