Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQDEIRLIIDELI-RIIPFEGISDKTL-LKVCTDLNL-ANSFCKFQNGIYSALECIVEDLNSSMEAELRNFNLEDMKVQEQIKLAVQICLSNYATLPNYREFLKNILSFSVLPKNIYFS--SKLLCRIVDMIWYGIHDQSTDFNYYTKRAI-LA-GVYL-SIILFFINDYSEGFADTLSFLDRCINNVM---------TFQKFKIHLKEIVGSFL
3C07 Chain:B ((38-251))
-KSEQTRALILETAMRLFQERG-YDRTTMRAIAQEAGVSVGNAYYYFAGKEHLIQGFYDRIAAEHRAAVREVLARETDLEARLAGVLKVWLDIATPYHEFAVQFFKNAADPDSPLSPFSPESEHARVEAIGIHRAVLAGAKTKVPEELRDILPELMWLSQMGLVLYWIFDRTEGRERSYRLAERGARLTARGVVLARFRVLRPLVREVHELFTDFL
General information:
TITO was launched using:
RESULT:
Template:
3C07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125877 for 1322 contacts (-95.2/contact) +
2D Compatibility (PS) -20417 + (NN) -8442 + (LL) 412
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -155824.0 ( -117.87 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_3C07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C07-query.scw
PDB file :
Tito_Scwrl_3C07.pdb
: