Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNNEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYARQDRKARSREPIT----AKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPVLSGPAKERIENSAIKELIVTNSIHLDEDRKPSNTKELSVAGLIAQAIIRVYERESVSVLFD |
1U9Z Chain:C ((9-275)) | ------------------SQNLAFKVAKLLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIIN-TQKNQNDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYSNIVD-----KLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKDKLN----DPIVLAPDKGALEFAKTASKILNAEYDYLE----------IAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT-YLSEVSKVS----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208492 for 2045 contacts (-102.0/contact) +
2D Compatibility (PS) -28443 + (NN) -19622 + (LL) 4680
1D Compatibility (HY) -19600 + (ID) 4250
Total energy: -275727.0 ( -134.83 by residue)
QMean score : 0.510
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