Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MEEALKDSILGALEM---VIDP-------ELGIDIVNLGLVYKVNV----DDEGVCTVDMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS----------------------------
2OST Chain:A ((1-148))
MGSTKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVDNRRTRTNRRNIVRSPYRGNDFDFAVAYVEELELFYVFP---VDVFISYGSEIHLVETDKRQRKPRSFGYREAWHLILQKGAAQKE
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44934 for 608 contacts (-73.9/contact) +
2D Compatibility (PS) -10860 + (NN) -65 + (LL) -124
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -60583.0 ( -99.64 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: