Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEG-----HKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESNSSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE |
3QZN Chain:A ((7-127)) | ----------------------------ATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVVPQI------NANHRYTTHLEFEKAIPTLA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13892 for 806 contacts (-17.2/contact) +
2D Compatibility (PS) -12574 + (NN) -1757 + (LL) 5288
1D Compatibility (HY) -7600 + (ID) 1300
Total energy: -31835.0 ( -39.50 by residue)
QMean score : 0.379
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