Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTKEDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIESGGDN----LAATFSPELVDFSIYIIDVAQGEKIPRKGG----------QGMIKSDFFVINKTDLAPYVGASLEQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS
2GF0 Chain:A ((6-174))-SNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQ---------V-I-------------------------------SC--DKSVCTLQITDTTGSHQFPAMQRLSISK-GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQRE-VDTREAQAVAQE--WKCAFMETSAKMNYNVKELFQELLTLETRRNM-


General information:
TITO was launched using:
RESULT:

Template: 2GF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55625 for 1177 contacts (-47.3/contact) +
2D Compatibility (PS) -16538 + (NN) -1468 + (LL) 3008
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -74623.0 ( -63.40 by residue)
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_2GF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GF0-query.scw
PDB file : Tito_Scwrl_2GF0.pdb: