Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKVIMQDLDQIIALENIGFSPEEAA--------TREALKLRIEQIQETFIVAEKNDEVIGYINGPVIKERYISDDLFKNVSINNSEGGYISVLGLVVAPNYQGQGIAGRLLNYFETLAKNHHRHGVTLTCRESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNIKKDDEV
3MGD Chain:A ((2-144))
MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPT---------YTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEW----------------------
General information:
TITO was launched using:
RESULT:
Template:
3MGD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78607 for 942 contacts (-83.4/contact) +
2D Compatibility (PS) -14424 + (NN) -5486 + (LL) 1372
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -101695.0 ( -107.96 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_3MGD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MGD-query.scw
PDB file :
Tito_Scwrl_3MGD.pdb
: