Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLETITLAHIYEEQGFFEEALQIYTNILKKTPDNTEA--------------LKQMKRLEKIQKNCAPFKHDALLKQHYLNFI-KGDRLS-VENLEKWLVEWN
3VTX Chain:A ((10-98))
------DIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAY-YILGSANFMIDEKQAAIDALQRAIALNT
General information:
TITO was launched using:
RESULT:
Template:
3VTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9472 for 424 contacts (22.3/contact) +
2D Compatibility (PS) -8385 + (NN) -10385 + (LL) 912
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -10236.0 ( -24.14 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3VTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VTX-query.scw
PDB file :
Tito_Scwrl_3VTX.pdb
: