Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYDCLNPIPFIRKFMPLSCLHPFGPFETPK-EPALNNPLLKAHSSDKICLLGPMKSGKTTFALKLAKGFK---NPVYINCNDMRLN-QNILSSWLLKWHLEK-KMDLLILDRIERLDFSLPKLPKIVLIPNYLSHITAPNFSLCYALGLNFKEYISFFKPNTP----KNTLFNRFLRDGNALDSLFTENEQEKILKKQENIQLAFQA-----YAPLMAKICSYQSKFVSAFYLYTQLKKELKTSKDTLYKLLHALEKQRIIFLAPNFENHKTKLYLCDFALPYSLTPSPSLLNVFENMVFLELYKQFPNYELYAHDNGIFILRNPTSKLALIAHAFPTPHFLEKQLLWCHKHGFLKIAVVSINAPISANNPPYKHLNFIDFSLDIQSILV |
| 2FF7 Chain:A ((7-204)) | ----------------DIT-FRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISL-ANPGMSVEKVIYAAK---LAGAHD--FISELREGYNTIVGEQGAGLSGGQRQRIAIARALVN--NPKILIFD-EA----------TSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55415 for 1305 contacts (-42.5/contact) +
2D Compatibility (PS) -18472 + (NN) -1765 + (LL) 11364
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -73538.0 ( -56.35 by residue)
QMean score : 0.217
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