Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSE---IEELIKSKYALIGSR---ILPLLSQKA--GAEFVKILQEQGLNTPLYGIAIDDKIKSFYS-HSAALLKG------------FCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYFLLD------DIITTGTT----LKEALKYLKTLNIKA----HFAIALCSADE |
2Q18 Chain:X ((1-291)) | MKLFRVVKRGYYISYAILDNSTIIRLDEDPIKALMRYSENKEVLGDRVTGIDYQSLLKSFQINDIRI-TKPIDPPEVWGSGISYENVAKILGKTIYEKVYDAVRPEIFFKATPNRCVGHGEAIAVRSDSEWTLPEPELAVVLDSNG-KILGYTIMDDVSARDLEAENPLYLPQSKIYAGCCAFGPVIVTSDEIKNPYSLDITLKIVREGRVFFEGSVNTNKMRRKIEEQIQYLIRDNPIPDGTILTTGTAIVPGRDKGLKDEDIVEITISNIGTLITPVKKRRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35700 for 1321 contacts (-27.0/contact) +
2D Compatibility (PS) -19014 + (NN) 10355 + (LL) 148
1D Compatibility (HY) 0 + (ID) 1400
Total energy: -45611.0 ( -34.53 by residue)
QMean score : 0.077
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