Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAIKKSELYSSLWAGADSLRGGMD---ASEYKNYVLNLLFLKYISDKAKNNMDSEIE--------VPQGCFYEDILALEGDKEIGDKLNKIIA-KIAERND---LKGVIDSVDFNDNTKLGEGKAMIDTLS-----------NLVKIFADL-SLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAGK-----------KGLTIYGQEKDISTTALCKMNMILHNSATADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFEDGTPPEKNGDFAFLLHIIK----SLNPTGKGAVILPHGVLFRGNAEAQIRKNLLMKGYIKGVIGLAPNLFYG-TSIPACVIVLDKENAHARKGVFVIDASKDFKKDGNKNRLREQDVQKMIDTFNALKEIPYYSKMVSLE----EISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
| 3UFB Chain:A ((12-495)) | ADQPMTTAQQLGAIVKSSRQIMRKDKGLNGDLDRLPMLTWIMFLKFLDDLEQMRETEAVLEGKSFQPAIEAPYRWRDWAAIEGGIT-GDELIAFINNDEAMRPDGTRGIGLFAYLRSLQGDNGGDRRDVIATVFKGMQNRMINGYLLRDVVDKINGIHFNSSEEMHTLSRLYETMLREMRD-AAGDSGEFYTPRPVVRFMVEVM----DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPE--NSLRFP--LREMGDKDRVDVILTNPPFG-----------GEEEKGILGNFP-EDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGPTDDIWYYQITVPEGRKKYTKTKPMESHEFDECLNWWSNRIVNQNAWKESASEIIKYSESGQLIDVNLDRKNPNSLEVLEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131077 for 3455 contacts (-37.9/contact) +
2D Compatibility (PS) -46913 + (NN) -21704 + (LL) 28104
1D Compatibility (HY) -22000 + (ID) 4350
Total energy: -197940.0 ( -57.29 by residue)
QMean score : 0.405
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