Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSKPIDQFGRK-----IIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYA-----IRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVH---VESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYF---HSLYFRE-SNGILIELATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 1MPY Chain:A ((1-307)) | MNKGVMRPGHVQLRVLDMSKALEHYVELLGL----IEMDRDDQGRVYLKAWTEVDKFSLVLRE----------ADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGEL--NSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAV--RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDE---NGTRVAQFLSLSTKAHDVAFIHHPE-------KGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPS-GNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRILNERFMTVLT-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106104 for 2258 contacts (-47.0/contact) +
2D Compatibility (PS) -30953 + (NN) -10938 + (LL) 1812
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -156683.0 ( -69.39 by residue)
QMean score : 0.366
|
|
|