Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MGKYFGTDGVRGVANSELTPELAFRLGRMGGYVLTRHVGEHPRVLVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKYIQYLKQTIENDFNGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVGSTHPEALAAF---VLDKKADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYLREQGLLNNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFLDH-NTTGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQ-KLENIRVSDKNHVTDNPKVSKVIDEVEAEM---------AGNGRVLVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND--- |
| 1K2Y Chain:X ((5-463)) | KAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR--GEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGAHNPPDYNGFKIVVAGETLAN----EQIQALRERIEK---NDLASGVGSVEQV-DILPRYFKQIRDDIAMA-KPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRN--PGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSSLPVPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149599 for 3895 contacts (-38.4/contact) +
2D Compatibility (PS) -46812 + (NN) -18742 + (LL) 796
1D Compatibility (HY) -23600 + (ID) 5650
Total energy: -243607.0 ( -62.54 by residue)
QMean score : 0.525
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