Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELSKRRQRQLKAQGYDLAFLSRIQPQGNIDFKKDDRSWMSGDGHHTVLHFYEYPSEDLDRFWLSDLMLIPGTRSFLSLYRANNRELKQEIKDAIEEKSTRITGNSKIVDNQQELDEIKDLTQLDREITKKNIAMLGMYVRNYSSSSTKEALFKKVEDIKDKTSNFKSTILSGELDFEYHAPFIPAQYQIDLPNRRRGIPIRAHDLAGGYFFNHTKLEDQRGVYMGWTPTKG-AVNFNFLERDERRTRSFMILSGNPKMGQRSFLLKHTDGLYAKGNYIRNFDANGTFLDQTRQQHGLILDLSGEANRINIFQVFPTVTNEEGTEIDKKKSYKLHIEKLKSIFKLLNSE-VTGDDLTTLGDMLNDFYIEEGLWARNPKLNPEKLKATDLVNDDYPILSD-FILFADDYKRSLMAQSKPDEIEIKSVNRIYKTFNELLTT--NAEMFEGTTEFQDISSEQVVTFDLSGLKG--TPNLLNAQIFSVLSLVSADIVNNGKRSKQLLKANPHLTEMD----MEHYIVNISEAQTLINPKYESSVELLADMIDTMGENFAGVVLSVNSLRGILFEAGAGNHKDPYVTAVQRIFGLMQYRVFAQTDETTIPLLANALTGSMNQSELETLPRLAKGQLFM-----NIAGVGNL-VFNQQLLAPEIKRYGGIQ |
| 4D2I Chain:A ((1-476)) | -------------------MIIGYVIGQAT---------------TQEALILAERP-------------VRLGTYVVLEY---------------------------------------------------DNVKALGLITNVTRGSPLLDDNMNDIEIVQRLKQFNNSIPVYTKAKVKLLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDG-----QIRIGSLIGKNVEVKLNI----NSFARHLAILA-ATGSGKSNTVAVLSQRISELGGSVLIFDYHGEY-------------------------------------------YDSDIKNLNRIEPKLNPLYMTPREFSTL------------------------LEIRENAIIQYRILRRAFIKVTNGIRAALAAGQIP-------FSTLNSQFYELMADALKDEVLNKFEEFMDRYSN-VIDLTSSDIIEKVKRGKVNVVSLTQLDEDSMDAVV-SHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKF-GVGLTIVSQRPKGLD--------------ENILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170060 for 3554 contacts (-47.9/contact) +
2D Compatibility (PS) -46273 + (NN) -2918 + (LL) 11944
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -229757.0 ( -64.65 by residue)
QMean score : 0.306
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