Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MRIQTTN------LDKGGGGKSSHTYNEGDWLSRV-MGKRVLLIDGARECNLTHSFDVTSDKTIYDIFITGEYEICRINDKLSLIRGDERLTDEQLDLASRNNKYLQLFMWFSEHYEELAEQ-------FDIILIDTH-NDESLVTANCIAVSDIVLG--VTDASTNGFRAWLALKKFVDDIKNEAIEVITK-KSYVKAEAYLIGNKIEYYGNNVTETCKQFLDVVQEDEAYLGSIQKKELMAKSLVINQ--SVFEQREHMTEKQKQDHQKFYDNIEYVYQNILTVLEGETK----- |
| 2WOJ Chain:A ((5-352)) | VEPNLHSLITSTTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTGMNNLSCMEIDPSAALKDMNDMLQGGALADLTGSIPGIDEALSFMEVMKHIKRQEQGEGETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYD--MDVNSIIVNQLLFAECKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPITDGKVIYELED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11332 for 2037 contacts (-5.6/contact) +
2D Compatibility (PS) -28242 + (NN) -3936 + (LL) -160
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -48920.0 ( -24.02 by residue)
QMean score : 0.214
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