Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRA--SQIWDWLYKKRVQSFDEMTNISK------DFI-----ALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQYYGLSVCVTTQVGCNIGCTFCASGLIKKQRDLNNGEITAQIMLVQKYFDERGQGERVSHIVVMG-IGEPFDNYTNVL-----KFLRTVNDDNGLAIGARHITVSTSGLAHKIREFANEGVQVNLAVSLHAPNNELRSSIMRINRSFPLEKLFA-----------------AIEYYIETTNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLSYVNL-IPYNPVSEHDQYSRSPKERVEAFYDVL----KKNGVNCVVRQEHGTDI--DAACGQLRSNTMKRDRQKAKVGR |
| 4R6H Chain:A ((28-421)) | ----ADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPG-NDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQ--GGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMA---RPANAKQMAEATSLPSGLTNVKADIFY-----ANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSET-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61087 for 2709 contacts (-22.5/contact) +
2D Compatibility (PS) -35476 + (NN) 4017 + (LL) 516
1D Compatibility (HY) -5200 + (ID) 2850
Total energy: -100080.0 ( -36.94 by residue)
QMean score : 0.170
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