Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALIEMSGVTKKYRRSTT---ALRNLNLSIQQGEFVYLVGPSGAGKSSLIRLLYREEKLSSGRLKVGEFNLNKLKRRQIPILRRS-IGVVFQDYKLLPTKTVYENVAFAM------QVIGAKRRHIKKRVPEVLELVGLKHKMRSF-PTQLSGGEQQRVAIARAIVNNPKLLIADEPTGNLDPEIAWEIMHLLERINLQ-GTTVLMATHNSQIVNTLR--HRVIEIEAGSVIRDEEKGEYGYHD
3TIF Chain:A ((1-228))--MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERR---KRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD---INVARFGERIIYLKDGEVEREEKLR------


General information:
TITO was launched using:
RESULT:

Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140279 for 1698 contacts (-82.6/contact) +
2D Compatibility (PS) -23471 + (NN) -7255 + (LL) 968
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -192437.0 ( -113.33 by residue)
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_3TIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TIF-query.scw
PDB file : Tito_Scwrl_3TIF.pdb: