Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARPLVEQTADRLLHLILEREYPVGAKLPNEYELAEDLDVGRSTIREAVRSLATRNILEVRQGSGTYISSKKGVSEDPLGFSLIKDTDRLTSDLFELRLLLEPRIAELVAYRITDDQLQLLEKLVGDIEDAVHAGDPKHLLLDVEFHSMLAKYSGNIAMDSLLPVINQSIHLINAN-YTNRQMKSDSLEAHREIIKAIREKNPVAAHDAMLMHIMSVRRSALKA
3C7J Chain:A ((24-227))
-AHLARTVIEEKLRNAIIDGSLPSGTALR-QQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLI---------------TEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVE--TDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLRFNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQY
General information:
TITO was launched using:
RESULT:
Template:
3C7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93398 for 1440 contacts (-64.9/contact) +
2D Compatibility (PS) -22314 + (NN) -13563 + (LL) 772
1D Compatibility (HY) -4400 + (ID) 2000
Total energy: -134903.0 ( -93.68 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3C7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C7J-query.scw
PDB file :
Tito_Scwrl_3C7J.pdb
: