Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIVNTSNDPAYNVALEAYAFQKLT-DIDEIFILWINEPAIIIGRHQNTIQEINKEFIDKNGIHVVRRLSGGGAVYHDLNNLNYTIISNNTQ--EGAFDFQTFSKPVIDTLAKLGVKAEF-TGRNDLEING---QKFAGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGIKSVRARVTNIVDHLSDKITVQEFSDAILAQMKEEYPEM-DEYVLSDAELSEIQAMRDNQFATWDWTYGKAPEYTIERGVRYPAGKITTYANVENSTIKSVKIFGDFFGVKPVDDIEKMLEGVRYDYKDVLAALKTVDTSQYFSRMTPEEITKAIVD |
| 1W66 Chain:A ((14-218)) | IDVRQLGTVDYRTAWQLQRELADARVAGGADTLLLLEHPAVYTAGRRTETH-E-----RPIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAEPLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIV-PCG--IS-------DAAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLP-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87482 for 1609 contacts (-54.4/contact) +
2D Compatibility (PS) -20570 + (NN) -3046 + (LL) 9188
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -109410.0 ( -68.00 by residue)
QMean score : 0.478
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