Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MNTHINITLDM-GETSKDLRIPLKISVKQLVMELDSIFSRTERRTKYQLRV--INKGILLGENDILAHHPVTTGDRIRIEEFY
2KJR Chain:A ((1-95))
MGHHHHHHSHGKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKGDTCVSTMDNNDAQLGYYANSDGLRLHVVDS-
General information:
TITO was launched using:
RESULT:
Template:
2KJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23179 for 518 contacts (-44.7/contact) +
2D Compatibility (PS) -8122 + (NN) 552 + (LL) 92
1D Compatibility (HY) -400 + (ID) 500
Total energy: -31557.0 ( -60.92 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2KJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJR-query.scw
PDB file :
Tito_Scwrl_2KJR.pdb
: