Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MKKRASGVLMHITSLPGDLGIGTFGREAYAFVDFLVETD-------QKFWQILPLTTTSFGDSPYQSFSA----------VAGNTHLIDFDLLTLEGFISKDDYQNISFGQDPEVVDYAGLFEKRRPVLEKAVKNFLQEERATRMLSDFLQEEKWVTDF----AEFMAIKEHFGNKALQEWDDKAIIRREEEALA---------------GYRQKLSEVIK---YHEVTQYFFYKQWFELKEYANDKGIQIIGDMPIYVS--------------------ADSVEVWTMPELFKLDRDKQPLAIAGVPADDFSDDGQLWGNPIYNWDYHKESDFDWWIYRIQSG-----VKMYDYLRID----------HFKGFSDYWEIRGDYQTANDGSWQPAPGPELFATIKEKLGDLPIIAENL-----GYIDERAERLLAGTGFPGMKIMEF-----GFYDTTGN-----SIDIPHNYTENTIAYAGTHDNEVINGWFENLTV-EQKAYAEN----YMRRLPNEPITETVLRTLYATVSQTTITCMQDLLDK---------PADSRMNMPNTVGGNWQWRMRKEDLTENRKAFLKEITTIYNRGNK |
| 4IUW Chain:A ((4-633)) | LPRIQDDLYLAVNGEWQAKTPIPPDKSVVSADSNLTDDIRQKLVADLSTMTKTAKTLPLQYAARLFAKANDQTRRQQLGIEPVRDRISFLMALTTLDQFRSAMPKLVADQYVLPISPYVDADMHDAEHNILNLGGPDTILPDAAMYNQEDAENAADLAAWSQMAAAMLAAVGF--SQTDQTAYVEAAKRFDRRLADYVPANVDLAVDSTYDNPLSWQAFEDAAGYLGIPQAFATYMPQTPAKVNAVVPAYLPHLSKLLTPDNYSEWHAWMVINELLTCATYLSDDLRQLAGQYDRFLAGQPEASSWTKHAFGIANEYFDDVIGQYYGQTYFGADAKADVTAMVKQILAQYRV--QLENNTWLSPATKQKAMRKLATMQVKMGYPARLFSLYDHLSVDVDDDLLTAILKLSAQTQAFWFKQLGQTVDRNQWN-MPGHLVNASYDPLKNDITFPAGILQPPYYSLKWTRAENLGGTGATIGHEISHSFDNNGALYDEYGNLHNWWTPADKQAFDQLVKAMAAQFDGRDYEGVKVNGTLTVSENMADNAGMDVALALLGDQPDVKDLQAFFITYARSWATKMRPERAKTVLRQDVHAPATLRVNVPVQNFPAW-YQAFNVQPQDGMYRQPQKRLTIWHQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11258 for 3600 contacts (-3.1/contact) +
2D Compatibility (PS) -51389 + (NN) -3208 + (LL) -148
1D Compatibility (HY) -7600 + (ID) 4400
Total energy: -78003.0 ( -21.67 by residue)
QMean score : 0.117
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