Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD-SKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDPSKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKL-----TADDVKSY-ETITSKGKFGQQLKAANSYVTGPLFLSVGDTLFGKSGEDAKGTNWG--NEAGVSVLKWIADQKKNDGF-VNLTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQ-FDKDIAKTK----------------------------------------------------------------------------------------------------------------------------------- |
| 3MP6 Chain:A ((1-517)) | --------------------------------MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDT-GIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEI--TPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS--KVNYGVTVLPTFK----GQPSKPFVGVLSAGIN-----AASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQK---GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAAEFGSSYWTSEYNPNAPILVGSEVAYKPRGEWIQCEVLKVVADGTRFEVRDPEPDELGNSGKVYKCNRKELLLIPPGFPTKNYPPGTKVLARYPETTTFYPAIVIGTKRDGTCRLRFDGEKETEVTRRLVLPSPTALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17578 for 3154 contacts (-5.6/contact) +
2D Compatibility (PS) -39073 + (NN) -14720 + (LL) 2852
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -86369.0 ( -27.38 by residue)
QMean score : 0.394
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