Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHL--DYEAYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLI--VKEN-------GGKGDALNMGINAANYDYFLCLDADSMLQVDSL---SQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVG-GYDTQTLGEDMELVMKLHFFCRNNNIPYRICYETDAV-CWSQAPTNLGDLRKQRRR |
| 1FO8 Chain:A ((1-213)) | ----------------------------------------------------LAVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTH----------------IRQP-DLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDN--GKEQ-------------MVDS--------------SKPELLYRTDFFPGLGWLLLAELWAELEPKWPK----AFWDDWMRRPEQ-----RKGRACVRPEISRTMTFGLKFIKLNQQFVPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144027 for 1433 contacts (-100.5/contact) +
2D Compatibility (PS) -20519 + (NN) -2047 + (LL) 9112
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -165181.0 ( -115.27 by residue)
QMean score : 0.342
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