Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYVKDGKLTGFDIEVAKAVFKGSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSERSQKYLFSYPIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNENITQILTNLSDGKADFKLFDGLTVNAIIKNQGLTNLKTIPLT-MRDQPYIY-FIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK
2PVU Chain:A ((38-266))------------------------------GATKKKVVVGTDAAFAPFEYMQKGKIVGFDVDLLDAVM-KAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLFGK----GPHIKKFE-TTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNF-ASEYYGMIFPK-NSELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLDRLKQ------


General information:
TITO was launched using:
RESULT:

Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93346 for 1857 contacts (-50.3/contact) +
2D Compatibility (PS) -24786 + (NN) -10281 + (LL) 3000
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -140863.0 ( -75.86 by residue)
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_2PVU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PVU-query.scw
PDB file : Tito_Scwrl_2PVU.pdb: