Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MEENMNIKQLKSKTML-----GTVALVSAFSFAS-TNADANTYNYAVDVDYLASAEEIAQAHPASNT------FPLGQCTWGVKEMATWAGNWWGNGGDWAASAASAGYTVGTQPRVGSIVCWTDGSYGHVAYVTA-VDPVTNKIQVLESNYAGHQWID--NYRGWFDPQNTAT----PGVVSYIYPN--- |
| 2PNN Chain:A ((11-258)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA-DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN------SWQPADISARDSVGN-TVLHALVEVADNTVDNTKFVTSMY----NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36381 for 1121 contacts (-32.5/contact) +
2D Compatibility (PS) -15558 + (NN) 3942 + (LL) 56
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -56491.0 ( -50.39 by residue)
QMean score : 0.205
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