Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR
1V1A Chain:A ((1-302))MLEVVTAGEPLVALVPQEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKG-SAGSALAPGAFDP-DYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV-------------EEALR----ALSAP-----EVVLKRGAKG---AWAFVDG-RRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK-------


General information:
TITO was launched using:
RESULT:

Template: 1V1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1153 for 3018 contacts (-0.4/contact) +
2D Compatibility (PS) -31560 + (NN) -7054 + (LL) 2812
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -51655.0 ( -17.12 by residue)
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_1V1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V1A-query.scw
PDB file : Tito_Scwrl_1V1A.pdb: