Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMVLERERFMTESDIKVIKRDGRLVSFDKYKIYTALLKASNKVIKMSPLVEAKLEMIADHVIAEIYNRFKDNIKIYEIQNIVEHKLLEANEYAIAQEYINYRTQRDFERSQATDINFSIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASS-QYGGCTADRIDEFLAPYAQLNYQKHLKDAKEWVIEDKQEDYARAKTQKDIYDAMQSLEYEINTLFT---------SNGQTPFTSLGFGLGTN--WFE-REIQKAILKIRIQGLGSEHRTAIFPKLIFTLKKGLNLEEDSPNYDIKQLALECATK-RMYPDVLSYDKIID---LTG------SFKAPMGCRSFLQGWRDANGQDVTSGR--MNLGVVTVNLPRVAMESN-------------------GDMDKFWE----IFNERMSIARDALVYRVERVKEAIPANA--PIL--YQYGAFGERLGKYDNVDRLFNH--RRATVSLGYIGLYEVASVFYGG-----------------------------------DWE-DNHQAKAFTVDIVRKMKQLCADWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEY-----YTNSFHYDVRKNP-TPFEKLDFEKI-YPETGASGGFIHYCEYPVLQ---QNPKALEAVWDYA-YDRVGYLGTNTPIDKCYQCQFEGDFTPTDRGFTCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVKHMNGSSIKNQGN |
| 2F3O Chain:A ((242-775)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAEKPETFWEAVQFVWLVQSALHQENYEQAISMGRIDQYLYPFFKKDIGEG------------------RINRELAFDILANLWIKTNEIVPAFDSLLEQYFSGQATNQAVTIGGCDIYGNDATNELTYLMLEVTDRL-----RLRQ-PNVHVRINKG---SPES----FLKRLAEAISSGCNNLALFFDDAAVKALKNAEVDDRDALNYTTDGCV-----------EIAPFGNSFTSSDAALINVAKALEYALNEGVDLQFGYEFGAKTEKPKFLEDLLEKLREQVSHIVKLVVRGSN----VLSYANAEVKPTPLLSLCVEDCFEKG----VDV---SRGGARYNFTGIQAVGIADVGDSLVAIEGALNAGYSMDDIVEACRKNFVGYEKLHKLLLQSPKYGNDDDAADKYTKMVLEWYCEEVNRHRNFRGGKFAAGCYPMTT-------N--VGFGFFTSALPSGRKSGEPLNPGVSPSTGMDREGVTAVINSASKLSYEN-LPNGASLTINLSSDVLGEKGDAVIEALIKSSMELGVMHVQFNILKE-------DL---LRK-AQQEPEKY---RW---LLVRVAGWSAYFV--ELSRPVQEEVIRRISCRI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81754 for 3808 contacts (-21.5/contact) +
2D Compatibility (PS) -46468 + (NN) -18226 + (LL) 19552
1D Compatibility (HY) -1600 + (ID) 2750
Total energy: -131246.0 ( -34.47 by residue)
QMean score : 0.309
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