Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSITSVKKSKPFKLGVAGLLVGASLALPLSVSAASYTVKSGDTLSAIAKNHKTTVQELVSLNSISNADVISIGDVLKL-------DNSKASQAEAKSQPTIENSMNSSSNLSSSDSAAKEEIARRESNGSYTAQNGQYYGRYQLSQ-SYLNGDLSPENQ-EKVADNYVVSRYGSWSAALSFWNSNGWY---------------------------- |
4B8V Chain:A ((36-224)) | ----------------CG-----------STSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKSCVSTPAEPTETCVPGLPGSYTIVSGDTLTNISQDFNITLDSLIAANTQIENPDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29433 for 977 contacts (30.1/contact) +
2D Compatibility (PS) -16452 + (NN) -6255 + (LL) 2036
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -788.0 ( -0.81 by residue)
QMean score : 0.233
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