Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDY--REKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTER--GHLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
2ZCW Chain:A ((6-196))
-------------------------------ETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQ-ERIYFAEAATDVRLEPLPEN-------PDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRETVTKVIGELAREGYIRSGYGKIQLLDLKGLKELAE
General information:
TITO was launched using:
RESULT:
Template:
2ZCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108573 for 1371 contacts (-79.2/contact) +
2D Compatibility (PS) -20193 + (NN) -6625 + (LL) 3652
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -137489.0 ( -100.28 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCW-query.scw
PDB file :
Tito_Scwrl_2ZCW.pdb
: