Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKIPSD-KVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPAQ-GKLKK-----------YDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
| 3QO6 Chain:A ((14-334)) | -------------------------------------------------TDELATVRLFQENTPSVVYITNLAVRQ------DAF---TL------DVLEVPQGSGSGFVWDK---QGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLD--HTLTTGVISGLRREISSAA--TGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPS----------GASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSV-----EQLGV-----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100271 for 2556 contacts (-39.2/contact) +
2D Compatibility (PS) -33299 + (NN) -8264 + (LL) 3604
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -163530.0 ( -63.98 by residue)
QMean score : 0.509
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