Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKYEIIANEMRNRIKNNVYPIDQPIPDEVSLAKEFNSSRMTMKRALDNLVAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNLLKDKKIKSKVIQFE-VQFPTEEVAAHLSIDQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIPGINDDVL-HDSIYNHITNVLQLKIAGTHRKIRACKSDHIDQQHLGCKQDDPILEVEHVGFLDTGIPFEYSFSRHRHDKFVVTSVNIRR
2OOI Chain:A ((21-161))-----------------------------------------------------------------------------------------------TSKVLVFKEMATPPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLND-DIAKGSIFDYLESNMKLRIGFSDIFFNVDKLTSSEASLLQLSTGEPCLRYHQTFYTMTGKPFDSSDIVFHYRHAQFYIPSK--


General information:
TITO was launched using:
RESULT:

Template: 2OOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -73795 -123.61 -530.90
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -123.61
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.580

(partial model without unconserved sides chains):
PDB file : Tito_2OOI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OOI-query.scw
PDB file : Tito_Scwrl_2OOI.pdb: