Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNSANTTAPSLLSAYGLNSYTSSNSGSVTKAAESTETAVADSASNKHEANQIRSGDFSIDSAIKKAADKYGVDEKLIRAVIKQESGFNAKAVSGAG---AMGLMQLMPSTASSLGVSNPL----------DPQQNVEGGTKYLKQMLDKY-DGNVSMALAAYNAGPGNVDRYGGI-------------PPFQETQNYVKKITSVYYA---------------------
1QSA Chain:A ((451-618))-----------------------------------------------------LAY----NDLFKRYTSGKEIPQSYAMAIARQESAWNPKV---KSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG-NNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY


General information:
TITO was launched using:
RESULT:

Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 554 -50996 -92.05 -424.96
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -92.05
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_1QSA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QSA-query.scw
PDB file : Tito_Scwrl_1QSA.pdb: