Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFRKPDEIAEAAIEAGMKKIKLPLPS---LLVLGFLGGAFIALGYLLDIRVIGDLPKEWGS-LSSLIGAAVFPVGLILVVLAGAELITGNMMSVAMALFSRKISVKELAINWGIVTIMNLIGALFVAYFFGHLVGLTETGPYLEKTIAVAQGKLDMSFGKVLISAIGCNWLVCLAVWLSFGAQDAAGKILGIWFPIMAFVAIGFQHVVANMFVIPAAIFA---GSFTWGQFIGNIIPAFIGNVIGGAVFVGLIYFIAYHKKDRSRKEMKQVS
3TE1 Chain:C ((3-265))---RAHKETLDKLTNAAINKINLLNTSKVKYLVSSAFAGLYVGIGILL-IFTIGGLLTDAGSPMTKIVMGLSFAIALSLVIMTGTELFAGNNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVG-TGLVDKGPVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCSFRTNSDTAKIIMIFLCLFAFITSGFEHSVANMTIYSVSLFSPTISTVTIGGAIYNLVAVTLGNIVGGALFMGLGTYILGKEKLNAAAE-----


General information:
TITO was launched using:
RESULT:

Template: 3TE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1411 -189456 -134.27 -740.06
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.82

3D Compatibility (PKB) : -134.27
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.373

(partial model without unconserved sides chains):
PDB file : Tito_3TE1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TE1-query.scw
PDB file : Tito_Scwrl_3TE1.pdb: