Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITRMSELFLRTLRDDPADAEVASHKLLIRA-GYIRP--VAPGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYET-TNRWTQYGDSVFRLKDRR----GNDYLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFV-MKDSYSFDIDAAGLKAAYHAHREAYQRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPDTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLVAGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHLVIANKDA---QARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELLGMPWIVVVGR-GWADGVVELRDRFSGQTRELVAGASLATDIAAAVTG |
| 1NJ8 Chain:A ((6-375)) | -----------------------WYSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRP--------EW-----------------------D------------------KF------------------------------------------------------PG----------------------------------AEYTM--------------------------------AFDTIF---------------------PD-------GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLK-GKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEK-FQVDETQLMEVVEKTL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181416 for 2886 contacts (-62.9/contact) +
2D Compatibility (PS) -38986 + (NN) -17403 + (LL) 12556
1D Compatibility (HY) -21200 + (ID) 4200
Total energy: -250649.0 ( -86.85 by residue)
QMean score : 0.448
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