Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYVVTGGTGFIGRHVVSRLLDGRPEARLWALVRRQSLSRFERLAGQWGDRVRPLVGDLTELELSERTIAELGDIDHVLHCAAVHDTTWADATRAVIELAARLDATFHHVSSIAVAGDFAGHYTEADFDVGQRLPTPYHRMTFEAERLVRSTPGLRYRIYRPAVVVGDSRTGEMDTIDGPYYLFGVLAKLAVLPSFTPMLLPDIGRTNIVPVDYVADALVALMHADGRDGQTFHLTAPTAIGLRGIYRGIAGAAGLPPLLGTLPGFVAAPVLNARGRAKVLRNMAATQLGIPAEIFDVVGCAPTFTSDTTREALRGTGIHVPEFATYAPGLWRYWAEHLDPDRARRNDPLLGRHVIITGASSGIGRASAIAVAK-RGATVFAL--ARNGNALDELVTEIRAHGG---QAHAFTCDVTDSASVEHTVKDILGRFDHVDYLVNNAG----RSIRRSVVNSTDRLHDYERVMAVNYFGAVRMVLALLPHWRE-RRFGHVVNVSSAGVQARNPKY--SSYLPTKAALDAFADVVASETLSDH--ITFTNIHMPLVATPMIVPSRRLNPVRAISAERAAAMVIRGLVEKPARIDTPLGTLAEAGNYVAPRLSRRILHQLYLGYPDSAAAQGISRPDADRPPAPRRPRRSARAGVPRPLRRLGRLVPGVHW |
| 1FMC Chain:A ((1-255)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDI--NADAANHVVDEIQQL--GGQ-AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP-KPF-D-MP----MADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN-KNINMT-SYASSKAAASHLVRNMAF-DLGE-KNIRVNGIAPGAILTDALKSVI-T-------PEIEQKMLQ-HTPI--RRLG-QPQDIANAALFLCSP-AASWVSGQILTVSGGGVQELN-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168930 for 1980 contacts (-85.3/contact) +
2D Compatibility (PS) -25616 + (NN) -7020 + (LL) 25284
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -189982.0 ( -95.95 by residue)
QMean score : 0.471
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