Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
1Y6O Chain:A ((1-124))
----------------------ALWQFRSLIKCAIPGSHPLLDFNNYGCYCGLGGSGTPVDELDRCCETHDCCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
1Y6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60428 for 931 contacts (-64.9/contact) +
2D Compatibility (PS) -13075 + (NN) -6544 + (LL) 2224
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -98573.0 ( -105.88 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1Y6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y6O-query.scw
PDB file :
Tito_Scwrl_1Y6O.pdb
: