Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NLYQFKNMIHCTVPSRPWWHFADYGCYCGRGGKGTAVDDLDRCCQVHDNCYGEAEKLGCWPYLTLYKYECSQGKLTCSGGNNKCEAAVCNCDLVAANCFAGA--PYIDANYNVNLKERCQ
2G58 Chain:A ((1-116))
SLLEFGKMILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNL--PDCNPKSDRYKYKRVNGAIVCE-KGTSCENRICECDKAAAICFRQNLNTYSKKYMLYPDF-LCK
General information:
TITO was launched using:
RESULT:
Template:
2G58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71638 for 840 contacts (-85.3/contact) +
2D Compatibility (PS) -12080 + (NN) -6798 + (LL) 100
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -99016.0 ( -117.88 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_2G58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G58-query.scw
PDB file :
Tito_Scwrl_2G58.pdb
: