Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA--GRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLK-PGSDTLQEVKLRLMDPQACS-HFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKP--PAVFTRISHYRPWINQILQAN
1FXY Chain:A ((1-227))
---------------------IVGGYNCKDGEVPWQALLINE--E-NEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAP--PATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAAN
General information:
TITO was launched using:
RESULT:
Template:
1FXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155478 for 1856 contacts (-83.8/contact) +
2D Compatibility (PS) -23549 + (NN) -7174 + (LL) 2000
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -201701.0 ( -108.68 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1FXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FXY-query.scw
PDB file :
Tito_Scwrl_1FXY.pdb
: