Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLLILTFVAAALAAPFDDDDKIVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS
3FP7 Chain:E ((1-223))
-----------------------IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDAGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN-
General information:
TITO was launched using:
RESULT:
Template:
3FP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129172 for 1941 contacts (-66.5/contact) +
2D Compatibility (PS) -24188 + (NN) -12648 + (LL) 1716
1D Compatibility (HY) -29200 + (ID) 8900
Total energy: -202392.0 ( -104.27 by residue)
QMean score : 0.804
(partial model without unconserved sides chains):
PDB file :
Tito_3FP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FP7-query.scw
PDB file :
Tito_Scwrl_3FP7.pdb
: