Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
3NXY Chain:A ((1-186))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 3NXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123179 for 1426 contacts (-86.4/contact) +
2D Compatibility (PS) -20344 + (NN) -11456 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8100
Total energy: -188071.0 ( -131.89 by residue)
QMean score : 0.669

(partial model without unconserved sides chains):
PDB file : Tito_3NXY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NXY-query.scw
PDB file : Tito_Scwrl_3NXY.pdb: