Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKK--QTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
3IAI Chain:A ((3-256)) | ------------------DQSHWRYGG---DPPWPRVSP-----ACAGRFQSPVDIRPQLAAFSPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPGLEMALGP-GREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTA--FARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSD--FSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPGD--SRLQLNFRATQPLNGRVIEASF--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105435 for 2039 contacts (-51.7/contact) +
2D Compatibility (PS) -27245 + (NN) -12416 + (LL) 4488
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -161508.0 ( -79.21 by residue)
QMean score : 0.261
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