Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVS---SAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS |
4G7A Chain:A ((25-248)) | -------------------------EWSYEGEKGPEH--------WAQLKPEFFWCKLKNQSPINIDKK-YKVKANLPKLNLYYKTAKESEVVNNGHTIQINIKED---NTLNYLG--EKYQLKQFHFHT------PSEHTIEKKSYPLEIHFVHKTE------------DGKILVVGVMAKLGKTNKELDKILNVAPAEE--GEKILDKNLNLNNLIPKDKRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMV---------N-PNNRPVQEINSRWIIEGF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123285 for 1723 contacts (-71.6/contact) +
2D Compatibility (PS) -23417 + (NN) -10271 + (LL) 3900
1D Compatibility (HY) -16400 + (ID) 3650
Total energy: -173123.0 ( -100.48 by residue)
QMean score : 0.410
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