Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
1BKF Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDKNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGVPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1BKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50277 for 784 contacts (-64.1/contact) +
2D Compatibility (PS) -11958 + (NN) -6969 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4350
Total energy: -86146.0 ( -109.88 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_1BKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BKF-query.scw
PDB file :
Tito_Scwrl_1BKF.pdb
: