Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHMKRFFVNFVVGQDPGSDVAFHFNPRFDGWDKVVFNTLQGGKWGSEERKR-SMPFKKGAAFELVFIVLAEHYKVVVNGNPFYEYGHRL-PLQMVTHLQVDGDLQLQSINFIGGQPLRPQGPPMMPPYPGPGHCHQQLNSLPTMEGPPTFNPPVPYFGRLQGGLTARRTIIIKGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGSWGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHRLSAFQRVDTLEIQGDVTLSYVQI |
| 4GXL Chain:A ((14-152)) | ---------ENLYFQHMPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKS--KDIALHLNPRLNI-KAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98783 for 1026 contacts (-96.3/contact) +
2D Compatibility (PS) -15071 + (NN) -7100 + (LL) 6408
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -127846.0 ( -124.61 by residue)
QMean score : 0.241
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