Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVS--TNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK |
3NPK Chain:A ((9-283)) | -------------FIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQS-NKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAH---LKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICEL-NNEESNQIYKLGLKLGLIFQINDDIIDVT------------------NSFVNLLGLEQAIKTKENLLNECEQDLEKLNE--KLAQMIQNLIIQYL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120549 for 2091 contacts (-57.7/contact) +
2D Compatibility (PS) -28113 + (NN) -11795 + (LL) 2376
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -182881.0 ( -87.46 by residue)
QMean score : 0.500
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